Diff for "EMAN2/Library"

Differences between revisions 7 and 30 (spanning 23 versions)

Documentation for Python or C++ Programmers

Detailed Documentation on all Classes/Methods/Functions

Autogenerated Python/C++ Documentation (Doxygen)
- There are a LOT of classes in the automatic docs. Basic images are represented by the EMData class
- The EMData methods process, cmp, align, and project are modular methods with many available functions. Use dump_processors(), dump_cmps(), etc.
- There are a few classes like analyzers and reconstructors which are not methods of EMData
- Many utility functions are static members of EMUtil

-  ⇤ ← Revision 7 as of 2007-03-01 00:53:57 → 
  Size: 651
  Editor: SteveLudtke
  Comment:
+   ← Revision 30 as of 2011-07-05 04:01:52 → ⇥
  Size: 1925
  Editor: SteveLudtke
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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- * [wiki:EMAN1To2Translation Limited Table of translations from EMAN1 functions -> EMAN2]
 * [http://blake.bcm.edu/eman2/doxygen_html/ Autogenerated Python/C++ Documentation (Doxygen)]
   * There are a LOT of classes in the automatic docs. Basic images are represented by the EMData class
   * The EMData methods process, cmp, align, and project are modular methods with many available functions. Use dump_processors(), dump_cmps(), etc.
   * There are a few classes like analyzers and reconstructors which are not methods of EMData
   * Many utility functions are static members of EMUtil
+==== Introductory concepts ====
 * [[EMAN2PythonStyleGuide|EMAN2 Python Programming Style Guide]]
 * [[Eman2ProgQuickstart|EMAN2 python programming quickstart]]
 * [[EMAN2ImageFormats|Image Formats in EMAN2]]
 * [[Eman2DataStorage|EMAN2 data storage & format conversion]]
 * [[Eman2BdbStorage|EMAN2 BDB access from Python]]
 * [[Eman2Metadata|Parameters/Metadata appearing in EMData attributes (and stored on disk with the image), accessed with get_attr and set_attr]]
 * [[Eman2AppMetadata|Parameters/Metadata for applications, not associated with a specific image, stored in bdb:project]]
 * [[EMAN1To2Translation|Limited Table of translations from EMAN1 functions -> EMAN2]]
 * Specific object types
  * [[Eman2TransformInPython|Using the Transform object (python) (arbitrary 2-D and 3-D transformations)]]
  * [[Eman2Reconstructors|Using Reconstructor classes]]

==== Intermediate Concepts ====
 * [[Eman2CProgQuickstart|EMAN2 C++ programming quickstart]]
 * [[Eman2ProgOverview|How to add new capabilities to EMAN2 in C++]]
 * [[Eman2UsingFTGL|Using FTGL in python/EMAN2]]

==== Advanced Topics ====
 * [[Eman2UsingCudaFromC++|The EMData class and CUDA ]]
 * [[Eman2FactoriesInPython| Abstract factories in python/EMAN2]]

==== Detailed Documentation on all Classes/Methods/Functions ====
 * [[http://blake.bcm.edu/eman2/doxygen_html/|Autogenerated Python/C++ Documentation (Doxygen)]]
  * There are a LOT of classes in the automatic docs. Basic images are represented by the EMData class
  * The EMData methods process, cmp, align, and project are modular methods with many available functions. Use dump_processors(), dump_cmps(), etc.
  * There are a few classes like analyzers and reconstructors which are not methods of EMData
  * Many utility functions are static members of EMUtil

{{attachment:sphere_cylinder_dist_grey_c.png}}