This is a mapping of EMAN1 EMData methods to EMAN2 so old scripts can be updated.

EMAN

EMAN2

.calcCCF

.calc_ccf

.copy

.copy

.doFFT

.do_fft or .do_fft_inplace

.EMData

.EMData

.gimmeFFT

Not necessary, no FFT caching

.Mean

.get_attr("mean") or .get_attr_dict()mean

.MinLoc

.calc_min_index or .calc_min_location()

.readImage

.read_image or EMData(path,n) constructor

.realFilter

.process("threshold.binary")

.ri2ap

.ri2ap

.rotateAndTranslate

.rot_scale_trans, .rot_scale_trans2D, others. see Transform class

.setRAlign

no equivalent

.setSize

.set_size

.setTAlign

no equivalent

.setValueAt

.set_value_at

.Sigma

see .Mean()

.toCorner

.process_inplace("xform.phaseorigin.tocorner")

.update

.update

.valueAt

.get_value_at

.writeImage

.write_image

.x(y)(z)Size

.get_(x,y,z)size

.zero

.to_zero

.set_complex, note new constructor EMData(nx,ny,nz,real=1) if real=0 image will be complex

.set_ri

.do_ift

EMAN1To2Translation (last edited 2010-03-27 00:26:03 by jgalaz)