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eman2:eman1transition_quickstart [2025/07/04 20:06] – created steveludtkeeman2:eman1transition_quickstart [2025/07/04 20:06] (current) steveludtke
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   * When importing micrographs, make sure you get the inversion correct. Particles in EMAN2 should be light on a darker background just like in EMAN1, and it is best if you start with the micrographs in this state.   * When importing micrographs, make sure you get the inversion correct. Particles in EMAN2 should be light on a darker background just like in EMAN1, and it is best if you start with the micrographs in this state.
   * You can use the import .box file tool just like in the tutorial   * You can use the import .box file tool just like in the tutorial
-  * EMAN2 is much more sensitive to having a sufficiently large [[EMAN2:BoxSize|box size]. Before doing the "Particles -> Generate Output" step, make sure the box size you plan to use is adequete.+  * EMAN2 is much more sensitive to having a sufficiently large [[EMAN2:BoxSize|box size]]. Before doing the "Particles -> Generate Output" step, make sure the box size you plan to use is adequete.
   * While there is no harm in doing unsupervised class-averaging, you probably already have a good 3-D starting model from your EMAN1 work, so you can likely skip the 2-D class averaging and initial model generation steps if you like   * While there is no harm in doing unsupervised class-averaging, you probably already have a good 3-D starting model from your EMAN1 work, so you can likely skip the 2-D class averaging and initial model generation steps if you like
  
eman2/eman1transition_quickstart.1751659593.txt.gz · Last modified: by steveludtke