= startAny =
 ''This program will generate a 3D model from a set of class averages, using cross common lines.''

== Usage ==
 startAny  <imagefile> [sym=<c?>] [proc=<num proc>] [rounds=<2-5>] [mask=<rad>] [lp=<radius>]

=== Parameters ===
 || <imagefile>||File containing class averages to be used||
 ||[sym=<c?>]||Cn symmetry if any||
 ||[proc=<num proc>]||Number of processors to use||
 ||[rounds=<2-5>]||Rounds of Euler angle determination to use||
 ||[mask=<rad>]||Mask radius||
 ||[lp=<radius>]||Lowpass filter radius in Fourier pixels||
 Typical usage: startAny classes.hed sym=c3 mask=42

== Description ==
This program uses cross common lines to determine the relative orientations of a set of class averages, then builds a 3d model from them. This will not work well on individual particle images, as they are generally too noisy. Typically  [/eman/eman1/progs/startnrclasses.html startnrclasses] is used to generate reference free class averages. The user then manually selects 10 or 20 of these class-averages, then runs them through startAny to generate a 3D model.

Despite a great deal of time and effort put into this program, it still doesn't work well on some data sets. Usually it will generate results which are adequate for use as a preliminary model for refinement.

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EMAN Manual page, generated Mon Jan  8 17:35:59 2007