Michael Bell, Ludtke Lab (2014 - 2019)

All are welcome to use the materials provided here. Credit is appreciated but not required.

Thesis

thesis.pdf, thesis.tex

Note: All protein illustrations in are licensed under a Creative Commons Attribution 4.0 International license by David S. Goodsell and the RCSB PDB.

Thesis Defense Presentation

defense_slides.key

Posters

cryoet_poster.pdf, cryoet_poster.pptx

scbmb_retreat_2016.pdf

biochem_retreat_2016.pdf

biophysical_society_2017.pdf

keck_arc_2017.pdf

sealy_2018.pdf

Note, these posters are have been uploaded without modification. There may be typos.

Talks

mapchallenge_wrapup_2017.key

microscopy_microanalysis_2018.ppt

Select Thesis Figures

Structural biology overview

struct_bio.png

Transmission electron microscopes (TEM)

tem.png

TEM grids

grid.png

Movie-mode imaging

movie.png

Basic image processing

imgproc.png

Fourier transforms

fft.png

Single particle analysis

spa.png

Contrast transfer function (CTF)

ctf.png

Resolution measurement via Fourier Shell Correlation (FSC)

fsc.png

Electron cryo-tomography (cryoET)

cryoet.png

Subtomogram Averaging

subtomoavg.png