|
Size: 1533
Comment:
|
Size: 1643
Comment: maybe a typo within the filename?
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 1: | Line 1: |
| == Beginners: Introductory Tutorials == | = EMAN2 TUTORIALS = |
| Line 3: | Line 3: |
| ==== 2D single particle analysis ==== | == Beginners (introductory tutorials) == |
| Line 5: | Line 5: |
| * The old SPR tutorial - [[attachment:workflow_tutorial_2010_08_25.pdf|Full tutorial on single particle reconstruction using the workflow]] (uses [[http://blake.grid.bcm.edu/dl/data/workshop5.iso|Workshop demo data DVD]]) | ==== 2D single particle analysis (SPA) ==== |
| Line 7: | Line 7: |
| * [[Ws2011/Eman2|The NEW tutorial from the 2011 EMAN2 workshop, compatible with EMAN 2.01]] | * The old SPR tutorial - [[attachment:workflow_tutorial_2010_08_25.pdf|Full tutorial on single particle reconstruction using the workflow]] (uses [[http://blake.grid.bcm.edu/dl/data/workshop5.iso|Workshop demo data DVD]]) |
| Line 9: | Line 9: |
| ==== 3D single particle tomography ==== * NEW single particle tomography USERS' GUIDE. [Partially used for the SPT tutorial from the 2011 EMAN2 workshop]. |
* [[Ws2011/Eman2|The NEW tutorial from the 2011 EMAN2 workshop, compatible with EMAN 2.01]] |
| Line 12: | Line 11: |
| [[attachment:e2spt_users_guide.pdf| e2spt_users_guide.pdf|&do=get]] | ==== 3D single particle tomography (SPT) ==== * NEW single particle tomography USERS' GUIDE. [Partially used for the SPT tutorial at the 2011 EMAN2 workshop]. [[attachment:e2spt_users_guide.pdf| e2spt_users_guide.pdf|&do=get]] * '''this is not a valid pdf file''', but it is accessible with openoffice |
| Line 16: | Line 18: |
| * [[attachment:population_dynamics_2009_11.pdf|Full tutorial on 2-D analysis for assessment of structural heterogeneity and population dynamics]] | * [[attachment:population_dynamics_2009_11.pdf|Full tutorial on 2-D analysis for assessment of structural heterogeneity and population dynamics]] |
| Line 18: | Line 20: |
| == Advanced Users: Using EMAN2 through a Python prompt (e2.py) == | == Advanced (EMAN2 through the ''e2.py'' Python prompt) == |
EMAN2 TUTORIALS
Beginners (introductory tutorials)
2D single particle analysis (SPA)
The old SPR tutorial - Full tutorial on single particle reconstruction using the workflow (uses Workshop demo data DVD)
The NEW tutorial from the 2011 EMAN2 workshop, compatible with EMAN 2.01
3D single particle tomography (SPT)
- NEW single particle tomography USERS' GUIDE. [Partially used for the SPT tutorial at the 2011 EMAN2 workshop].
this is not a valid pdf file, but it is accessible with openoffice
2D assessment of heterogeneity
Advanced (EMAN2 through the ''e2.py'' Python prompt)
* Generate and display an EMAN2 test image
* Rotate, translate, scale or mirror an image
* Add and multiply images, add and multiply by constants
* Convert a real/imaginary image into an amplitude/phase image and vice versa
* Iterate through the pixels of an image
* Make a projection of a 3D model, project through the asymmetric unit
