Differences between revisions 160 and 164 (spanning 4 versions)
Revision 160 as of 2020-07-13 11:52:52
Size: 6970
Editor: SteveLudtke
Comment:
Revision 164 as of 2021-02-26 21:26:22
Size: 7177
Editor: MuyuanChen
Comment:
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
= EMAN2 TUTORIALS =

== Beginners (i
ntroductory tutorials) ==
= EMAN2 Introductory Tutorials =
Line 9: Line 7:
=== Video tutorials and discussions === == Video tutorials and discussions ==
Line 12: Line 10:
=== Written Tutorials === == Written Tutorials ==
Line 14: Line 12:
==== Tutorial Data Downloads==== === Tutorial Data Downloads ===
Line 26: Line 24:
==== Short tutorials and info sheets ==== === Short tutorials and info sheets ===
Line 32: Line 30:
==== Single particle analysis (SPA) - 2D particles ==== === Single particle analysis (SPA) - 2D particles ===
Line 41: Line 39:
 * [[EMAN2/e2gmm | Deep neural network and Gaussian mixture model based 3D structural variability analysis]] (requires CUDA, still under active development)
Line 46: Line 45:
==== Tomography - tilt series through subtomogram averaging ==== === Tomography - tilt series through subtomogram averaging ===
Line 56: Line 55:
 * More advanced topics for subtomogram averaging
  * [[EMAN2/e2tomo_more|Advanced Subtomo]]
Line 57: Line 58:
==== Exchanging Data Between EMAN2 and Other Software ==== === Exchanging Data Between EMAN2 and Other Software ===
Line 62: Line 63:
=== Archive of Workshop Material (Lectures, specific tutorials, etc. === == Archive of Workshop Material (Lectures, specific tutorials, etc. ==

EMAN2 Introductory Tutorials

Please note that we are continuously developing and updating the tutorials. Most tutorials include the necessary data. If you have a request for a particular tutorial please feel free to email sludtke@bcm.edu.

Video tutorials and discussions

Written Tutorials

Tutorial Data Downloads

The actual tutorials are in the sections below, this section contains the various test data sets.

Individual tutorial data downloads are available below, but for convenience, we have combined the data for the GUI introduction, single particle analysis tutorial, single particle 2-D dynamics tutorial and small tomography tutorial into a single download:

Alternatively, these individual downloads cover the following standard workshop tutorial sequence:

Short tutorials and info sheets

Single particle analysis (SPA) - 2D particles

Tomography - tilt series through subtomogram averaging

Exchanging Data Between EMAN2 and Other Software

Archive of Workshop Material (Lectures, specific tutorials, etc.

EMAN2/Tutorials (last edited 2024-04-05 01:51:27 by MuyuanChen)